Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCTACCATGTAGCCAGC
..(((((.((((..((((((..&))))))..))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001278462
GeneSymbolMDM2
Binding site6446,6464
Score0.846
Seed0
Au0.676
Energy-18.3
Binding len18
Me-9.417
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure