Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CAGTCACAGGCAGCTGCAGTTGCGA
((((((((((((((((.....&.))))))))))))))))
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278482
GeneSymbolSUPT20H
Binding site2672,2697
Score0.923
Seed1
Au0.515
Energy-26.1
Binding len17
Me-3.938
Phylopstem0.477637
Phylopflank0.4810605286250001
Longest consecutive pairings16
Position of longest consecutive pairings0
Pairings in 3prime end3
PositionCDS
2D Structure