Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCTCAGAGGGAGGGCAGCCAGTA
.((((((((((((((((((...&))))....))))))).))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001363835
GeneSymbolRHBDL3
Binding site2539,2563
Score0.808
Seed1
Au0.382
Energy-24.1
Binding len24
Me-3.793
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end5
Position3UTR
2D Structure