Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTGTCAATGGCTGCTGTAT
.((((((.((.((((..(((.&)))..)))).)).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278503
GeneSymbolSTT3A
Binding site255,275
Score0.846
Seed1
Au0.559
Energy-19.7
Binding len20
Me-9.165
Phylopstem3.7297716666666667
Phylopflank5.61072897375
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure