Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTCATGTCAGGGATGCCCCAACCAGCGGCTGTG
..(((((((((((((...(((&.))).))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278506
GeneSymbolNUBP1
Binding site79,114
Score0.897
Seed1
Au0.324
Energy-23.5
Binding len20
Me-5.19
Phylopstem2.2072057857142857
Phylopflank1.9764691700000006
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure