Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTGGCAACTGCAGTTGGAAA
((.(((((((((((((.((((&)))).))))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278508
GeneSymbolZNF180
Binding site541,563
Score0.885
Seed0
Au0.574
Energy-25.0
Binding len22
Me-5.495
Phylopstem-0.025291115384615377
Phylopflank-0.01932955875000001
Longest consecutive pairings13
Position of longest consecutive pairings4
Pairings in 3prime end7
PositionCDS
2D Structure