Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTATGAATGTAGTGAATGTGGAAAATCCTTCAGCCGGAGCTCGCAC
.(((((((.((((((.((((.&.)))))))))).)))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278508
GeneSymbolZNF180
Binding site1343,1392
Score1.0
Seed1
Au0.515
Energy-25.4
Binding len21
Me-5.083
Phylopstem-0.05867316249999996
Phylopflank-0.32482415
Longest consecutive pairings10
Position of longest consecutive pairings10
Pairings in 3prime end6
PositionCDS
2D Structure