Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTGGCAACTGCAGTTGGAAA
((.(((((((((((((.((((&)))).))))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278509
GeneSymbolZNF180
Binding site544,566
Score0.885
Seed0
Au0.574
Energy-25.0
Binding len22
Me-5.495
Phylopstem-0.009568038461538463
Phylopflank-0.014219496250000019
Longest consecutive pairings13
Position of longest consecutive pairings4
Pairings in 3prime end7
PositionCDS
2D Structure