Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTATGAATGTAGTGAATGTGGAAAATCCTTCAGCCGGAGCTCGCAC
.(((((((.((((((.((((.&.)))))))))).)))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278509
GeneSymbolZNF180
Binding site1346,1395
Score1.0
Seed1
Au0.515
Energy-25.4
Binding len21
Me-5.083
Phylopstem-0.011567149999999993
Phylopflank-0.26240826874999995
Longest consecutive pairings10
Position of longest consecutive pairings10
Pairings in 3prime end6
PositionCDS
2D Structure