Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCAGCTGGAGCTCGCAT
.(((((((.((((((.((((.&)))))))))).)))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278509
GeneSymbolZNF180
Binding site1291,1311
Score0.853
Seed1
Au0.515
Energy-23.2
Binding len20
Me-5.083
Phylopstem-0.4944069125
Phylopflank-0.020988126249999992
Longest consecutive pairings10
Position of longest consecutive pairings10
Pairings in 3prime end6
PositionCDS
2D Structure