Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCAATGGCCTGGTGCAGCTGCT
..((((((((((((((.((((&))))..))))))....)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278512
GeneSymbolAP3B2
Binding site1508,1533
Score0.846
Seed1
Au0.412
Energy-23.2
Binding len25
Me-4.957
Phylopstem4.674154222222222
Phylopflank4.282697542500002
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure