Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCCACTGCGGTA
.....((((((((.((((((.&)))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278518
GeneSymbolMDM4
Binding site4661,4677
Score1.0
Seed0
Au0.632
Energy-20.7
Binding len16
Me-14.522
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure