Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCCACTGCGGTA
.....((((((((.((((((.&)))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278519
GeneSymbolMDM4
Binding site4471,4487
Score1.0
Seed0
Au0.632
Energy-20.7
Binding len16
Me-14.522
Phylopstem-0.104024375
Phylopflank-0.1457424125
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure