Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGACTTCCTGGGCTGAACTGATCCTTCCACCTCAGCCTCCTGAGTAGCTGGGAC
((.((((((((((((..((((&.)))))))))......))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278536
GeneSymbolRCHY1
Binding site2392,2450
Score0.923
Seed0
Au0.441
Energy-20.0
Binding len27
Me-5.728
Phylopstem0.2948819166666667
Phylopflank0.04238885000000002
Longest consecutive pairings9
Position of longest consecutive pairings17
Pairings in 3prime end6
Position3UTR
2D Structure