Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGACTTCCTGGGCTGAACTGATCCTTCCACCTCAGCCTCCTGAGTAGCTGGGAC
((.((((((((((((..((((&.)))))))))......))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278537
GeneSymbolRCHY1
Binding site2365,2423
Score0.923
Seed0
Au0.441
Energy-20.0
Binding len27
Me-5.728
Phylopstem0.1648422555555556
Phylopflank0.28751287624999994
Longest consecutive pairings9
Position of longest consecutive pairings17
Pairings in 3prime end6
Position3UTR
2D Structure