Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGAGGTCAGCGGGGCTGCGAG
((((((((.(.((((......&.))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278537
GeneSymbolRCHY1
Binding site158,180
Score1.0
Seed1
Au0.368
Energy-17.9
Binding len16
Me-8.052
Phylopstem-0.03425822500000001
Phylopflank0.15622924697500004
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure