Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGACTTCCTGGGCTGAACTGATCCTTCCACCTCAGCCTCCTGAGTAGCTGGGAC
((.((((((((((((..((((&.)))))))))......))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278538
GeneSymbolRCHY1
Binding site2468,2526
Score0.923
Seed0
Au0.441
Energy-20.0
Binding len27
Me-5.728
Phylopstem0.6878903611111109
Phylopflank0.0918036575
Longest consecutive pairings9
Position of longest consecutive pairings17
Pairings in 3prime end6
Position3UTR
2D Structure