Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCTACAGGAACTGTGGCTGA
...(((((((((((((((((.&))).))))...)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278542
GeneSymbolDIXDC1
Binding site1220,1242
Score0.846
Seed0
Au0.618
Energy-19.3
Binding len22
Me-6.515
Phylopstem-0.12127038095238098
Phylopflank0.43521905499999985
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure