Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCGGCCGGGAGCTCGCGGG
((((((((.(((((((..(((&))))))))))..)))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278546
GeneSymbolNR6A1
Binding site70,92
Score0.846
Seed1
Au0.235
Energy-20.1
Binding len22
Me-4.994
Phylopstem5.517593333333333
Phylopflank3.10358116625
Longest consecutive pairings10
Position of longest consecutive pairings12
Pairings in 3prime end6
Position5UTR
2D Structure