Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTAATTCATTATCTGTATGAAGTTATAAAAGTAGCTGTAGA
((((((((((..((((((...&.))))))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278555
GeneSymbolUBE2E3
Binding site1143,1186
Score0.923
Seed1
Au0.735
Energy-18.8
Binding len20
Me-10.109
Phylopstem5.8946956
Phylopflank5.290615249999998
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure