Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGACTGCGGCCGCGGCTTCGCGCAGC
(((((((((((((((((.(((&)))...)))))))))))))....)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278559
GeneSymbolZNF316
Binding site3143,3171
Score0.846
Seed1
Au0.221
Energy-26.2
Binding len28
Me-3.938
Phylopstem1.118068761904762
Phylopflank1.3673597665
Longest consecutive pairings13
Position of longest consecutive pairings9
Pairings in 3prime end7
PositionCDS
2D Structure