Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGGCTTCCTCTATCCCTTCTCGGCCGCAGCTCTGCAGC
(((((((((((((((.((((.&.))))..)))))))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278563
GeneSymbolCOL26A1
Binding site218,258
Score0.846
Seed1
Au0.265
Energy-27.0
Binding len25
Me-4.171
Phylopstem1.9311721176470589
Phylopflank1.9290412075
Longest consecutive pairings11
Position of longest consecutive pairings7
Pairings in 3prime end6
PositionCDS
2D Structure