Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTCTGGCCAACCGCACGCTGCT
..(((((((((((((..((((&)).))...)))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278615
GeneSymbolPCDH1
Binding site1670,1693
Score0.808
Seed1
Au0.412
Energy-23.9
Binding len23
Me-5.19
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings7
Pairings in 3prime end6
PositionCDS
2D Structure