Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGAGCTGCAGCATGCC
..((((((((((((.(.....&).))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278616
GeneSymbolBUB1
Binding site346,362
Score0.923
Seed1
Au0.441
Energy-19.0
Binding len16
Me-5.692
Phylopstem0.9565594846153846
Phylopflank2.28415952625
Longest consecutive pairings9
Position of longest consecutive pairings5
Pairings in 3prime end2
PositionCDS
2D Structure