Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCTTAGGTGCCAGGC
.((((((((.............&.)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001278618
GeneSymbolPTPN1
Binding site2927,2942
Score0.846
Seed1
Au0.485
Energy-15.3
Binding len10
Me-14.322
Phylopstem0.06554336250000001
Phylopflank1.099809835
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure