Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGGCGGTAGCTGCAGG
((((((((((.(((((.....&))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278618
GeneSymbolPTPN1
Binding site23,40
Score1.0
Seed1
Au0.294
Energy-24.0
Binding len17
Me-6.762
Phylopstem1.56655148
Phylopflank1.1052298835526315
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure