Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCAGCGACTCCGGCTGCT
..(((((((.((((((.((((&))))..)))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278619
GeneSymbolPCDH11Y
Binding site165,186
Score1.0
Seed1
Au0.397
Energy-23.3
Binding len21
Me-6.2
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end7
Position5UTR
2D Structure