Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGTGAGCAGTAGCTGCAC
.(((((((((.(((....(((&)))...))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278619
GeneSymbolPCDH11Y
Binding site29,49
Score1.0
Seed1
Au0.338
Energy-21.3
Binding len20
Me-7.587
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure