Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCATCCGCAGCTCCAGG
(((.((((((((.((..((((&)))))).)))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278625
GeneSymbolCRNKL1
Binding site228,248
Score0.923
Seed0
Au0.324
Energy-21.6
Binding len20
Me-8.492
Phylopstem-0.2876653
Phylopflank-0.27463427275
Longest consecutive pairings8
Position of longest consecutive pairings5
Pairings in 3prime end6
PositionCDS
2D Structure