Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCATACTACAGCCAGCAGCTCGCGAT
(((((((((((((((((....&.))))))).)))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278669
GeneSymbolNFATC1
Binding site2475,2502
Score0.846
Seed1
Au0.353
Energy-24.6
Binding len21
Me-3.938
Phylopstem2.647402157894737
Phylopflank2.2909210987499997
Longest consecutive pairings7
Position of longest consecutive pairings13
Pairings in 3prime end4
PositionCDS
2D Structure