Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AATGCTCAGCCCTGCGTTGTGTGTTTTCAGATGAGTTACTGTTAACAGGTA
((((((((((((((((((....&.))))))))))))).....................))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001278672
GeneSymbolNFATC1
Binding site3369,3420
Score0.846
Seed1
Au0.529
Energy-21.7
Binding len41
Me-3.938
Phylopstem0.7377469564102563
Phylopflank1.539873968125
Longest consecutive pairings13
Position of longest consecutive pairings27
Pairings in 3prime end4
Position3UTR
2D Structure