Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AATGCTCAGCCCTGCGTTGTGTGTTTTCAGATGAGTTACTGTTAACAGGTA
((((((((((((((((((....&.))))))))))))).....................))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001278673
GeneSymbolNFATC1
Binding site2960,3011
Score0.923
Seed1
Au0.529
Energy-21.7
Binding len41
Me-3.938
Phylopstem1.2075194538461536
Phylopflank1.532365455
Longest consecutive pairings13
Position of longest consecutive pairings27
Pairings in 3prime end4
Position3UTR
2D Structure