Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGTGAGAAGCGGGAGCAGCTGGAGCTGCGT
.(((((((.(((((((.....&.))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278685
GeneSymbolAMOTL2
Binding site1661,1694
Score1.0
Seed1
Au0.353
Energy-23.6
Binding len17
Me-4.85
Phylopstem-0.3209761285714286
Phylopflank0.32562846375
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end3
PositionCDS
2D Structure