Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCAGCCGTGGTGGTGCT
..(((((((((((((..((((&))))))))))))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278687
GeneSymbolSSTR3
Binding site688,708
Score0.923
Seed1
Au0.279
Energy-20.6
Binding len20
Me-5.19
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings14
Position of longest consecutive pairings6
Pairings in 3prime end6
PositionCDS
2D Structure