Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCTGGATGCTAGGTA
((((((((..((..(((((...&)))))))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001278712
GeneSymbolATG3
Binding site2169,2187
Score1.0
Seed1
Au0.603
Energy-19.3
Binding len18
Me-8.382
Phylopstem2.18403009125
Phylopflank2.66135418075
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure