Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCCGGTGGCGGCGCAGCTACGGCAAG
((((((((((.(((((..((.&.))....)))))))))))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278712
GeneSymbolATG3
Binding site13,41
Score0.846
Seed1
Au0.338
Energy-19.7
Binding len26
Me-6.762
Phylopstem3.821567384615384
Phylopflank1.5914326991666667
Longest consecutive pairings11
Position of longest consecutive pairings8
Pairings in 3prime end5
Position5UTR
2D Structure