Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGACGAGCGCGGCTTCAC
.((.(((((((.((((..(((&)))..)))).))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278727
GeneSymbolRFXANK
Binding site736,757
Score0.846
Seed0
Au0.368
Energy-22.4
Binding len21
Me-10.172
Phylopstem3.000695714285714
Phylopflank2.989246095875
Longest consecutive pairings7
Position of longest consecutive pairings4
Pairings in 3prime end6
PositionCDS
2D Structure