Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCTGGCCCGAGGCGCTGA
...((((.(((((((((((((&))))))).))))....)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278727
GeneSymbolRFXANK
Binding site1001,1024
Score0.846
Seed0
Au0.368
Energy-18.9
Binding len23
Me-8.828
Phylopstem5.5227224999999995
Phylopflank3.6701329112500005
Longest consecutive pairings7
Position of longest consecutive pairings16
Pairings in 3prime end8
PositionCDS
2D Structure