Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTATAGCTGATGTGTGCT
..(((....(((((((((((.&))))))))))).....))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278743
GeneSymbolTSPAN6
Binding site3238,3258
Score0.846
Seed0
Au0.632
Energy-17.9
Binding len20
Me-11.772
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings9
Pairings in 3prime end7
Position3UTR
2D Structure