Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACGTTACAGGAACAGTGTTTCTGCAGCTGCC
..((((((((((((((((.((&)).))))))...........)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001363852
GeneSymbolDEPDC5
Binding site4533,4564
Score0.846
Seed1
Au0.471
Energy-23.5
Binding len31
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure