Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAAAAAGCATCGTGCTGCAAC
(((((((.((((.(((..(((&))).....)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278929
GeneSymbolPPWD1
Binding site1139,1162
Score0.923
Seed1
Au0.603
Energy-16.8
Binding len23
Me-7.54
Phylopstem5.579163714285714
Phylopflank5.328607582625
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure