Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TTGCAACGGCAGCTGCC
..((((((((.(((((((...&))))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278945
GeneSymbolPBK
Binding site20,37
Score0.872
Seed1
Au0.409
Energy-26.6
Binding len17
Me-7.782
Phylopstem-0.04211052500000001
Phylopflank0.18076460916666662
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure