Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCACAAGGCGCAGCTGCT
..(((((((((.((((..(((&))).))))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001279352
GeneSymbolJRK
Binding site666,686
Score1.0
Seed1
Au0.368
Energy-23.7
Binding len20
Me-8.304
Phylopstem0.2664885555555555
Phylopflank0.13819154875
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure