Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCAGGCATCTTCAGGCCGCAGACTGGCAT
.(((((((((((((..(((((&.)))))..)))))))).))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001279353
GeneSymbolVPS45
Binding site201,233
Score0.846
Seed1
Au0.456
Energy-22.0
Binding len24
Me-4.762
Phylopstem-0.9997305133333334
Phylopflank2.6175921725
Longest consecutive pairings8
Position of longest consecutive pairings8
Pairings in 3prime end6
Position5UTR
2D Structure