Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCCCCGGGCCAGCTGTAT
.(((((((((((..(((((((&))))))).)))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001280543
GeneSymbolDPF3
Binding site350,373
Score0.846
Seed1
Au0.324
Energy-23.5
Binding len23
Me-5.939
Phylopstem0.17672110714285713
Phylopflank0.018951661249999932
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure