Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCCCCGGGCCAGCTGTAT
.(((((((((((..(((((((&))))))).)))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001280544
GeneSymbolDPF3
Binding site664,687
Score0.846
Seed1
Au0.324
Energy-23.5
Binding len23
Me-5.939
Phylopstem0.16840865714285713
Phylopflank0.032990852500000015
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure