Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGACCAGCCGCCTCCTGGGCTCCTCCTCCTCCGTCAGTAGAGCTGCT
..(((((((((((((..(((.&)))...))))))).............................)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001280544
GeneSymbolDPF3
Binding site2285,2334
Score0.821
Seed1
Au0.471
Energy-21.8
Binding len49
Me-5.19
Phylopstem1.2309442095238095
Phylopflank0.81520785375
Longest consecutive pairings7
Position of longest consecutive pairings36
Pairings in 3prime end5
Position3UTR
2D Structure