Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCCTACTGCCGCAGGTGCAAG
(((((.(((((((.(((.(((&)))..))).))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001280546
GeneSymbolIFT122
Binding site3536,3559
Score0.923
Seed0
Au0.368
Energy-26.6
Binding len23
Me-6.695
Phylopstem2.9058701428571427
Phylopflank4.950696962499999
Longest consecutive pairings7
Position of longest consecutive pairings7
Pairings in 3prime end6
PositionCDS
2D Structure