Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGGGGTCTGCTGGGCTGTGAA
((((((((((((((.((((((&)))))).)).))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001280546
GeneSymbolIFT122
Binding site3611,3636
Score0.962
Seed1
Au0.471
Energy-22.2
Binding len25
Me-4.673
Phylopstem4.824586411764706
Phylopflank5.232431337499999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure