Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAGCAACTGCAGCG
.....(((((((((((..(((&))).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001363856
GeneSymbolHSCB
Binding site344,360
Score0.923
Seed0
Au0.456
Energy-21.5
Binding len16
Me-13.666
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure